TSS: Hg 102701.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-616 |entrez_id=6418 |gc_percent=0.60199 |gene_alias=2PP2A|I2PP2A|IGAAD|IPP2A2|PHAPII|TAF-I|TAF-IBETA |gene_description=SET nuc...") |
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{{TSSDetail | {{TSSDetail | ||
|I2PP2A= | |||
|IGAAD= | |||
|IPP2A2= | |||
|PHAPII= | |||
|TAF-I= | |||
|TAF-IBETA= | |||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |||
|distance_to_tss=-616 | |distance_to_tss=-616 | ||
|end=128684487 | |||
|entrez_id=6418 | |entrez_id=6418 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
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|nearest_refseq=NM_003011 | |nearest_refseq=NM_003011 | ||
|nearest_unigene=Hs.436687 | |nearest_unigene=Hs.436687 | ||
|num_trans=0 | |||
|species=human | |||
|start=128684453 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102701.1 | |tss_id=hg_102701.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -616 |
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| Nearest PromoterID: | NM_001248000 |
| Entrez ID: | 6418 |
| Nearest Unigene: | Hs.436687 |
| Nearest Refseq: | NM_003011 |
| Nearest Ensembl: | ENSG00000119335 |
| Gene Name: | SET |
| Gene Alias: | 2PP2A |
| Gene Description: | SET nuclear proto-oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |