TSS: Rfhg 187617.1: Difference between revisions
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|gene_description=zinc finger protein 778 | |gene_description=zinc finger protein 778 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 14:34, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5|PRJNA615891|PRJNA401781|PRJNA548673 | |||||||||||||||
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| Protocol | CAGE|TIF-seq2|ReCappable-seq|SLIC_CAGE | |||||||||||||||
| TSS cluster detected* | 5 | |||||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2897624,EH38E1837918) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -62 |
|---|---|
| Nearest PromoterID: | NM_182531 |
| Entrez ID: | 197320 |
| Nearest Unigene: | Hs.647385 |
| Nearest Refseq: | NM_182531 |
| Nearest Ensembl: | ENSG00000170100 |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.108108 |
| GC%: | 0.684211 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |