TSS: Rfhg 189024.1: Difference between revisions

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|gene_description=discs large MAGUK scaffold protein 4
|gene_description=discs large MAGUK scaffold protein 4
|gene_id=1742
|gene_id=1742
|gene_name=DLG4
|gene_name=LLGL scribble cell polarity complex component 1; discs large MAGUK scaffold protein 4
|gene_source=HGNC:2903 HGNC:6628
|gene_source=HGNC:2903 HGNC:6628
|gene_symbol=DLG4 LLGL1
|gene_symbol=DLG4 LLGL1
Line 35: Line 35:
|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENST00000649520.1 ENST00000649186.1 NM_001321076.3 NM_001321077.3 AK299801 AK297346
|transcript_name=ENST00000649520.1 ENST00000649186.1 AK299801 AK297346
|tss_cluster_detected=2
|tss_cluster_detected=2
|tss_id=rfhg_189024.1
|tss_id=rfhg_189024.1

Latest revision as of 15:01, 14 March 2025

Basic information about the TSS

TSS ID:rfhg_189024.1
Species:human
Chr:chr17
Start:7205118
End:7205206
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:dELS,CTCF-bound (EH38D2905587,EH38E1844106)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000649520.1:0
ENST00000649186.1:0
AK299801:0
AK297346:0
GeneID:1742
HGNC/MGI_ID:HGNC:2903 HGNC:6628
UniProt_ID:B7Z4H2 B7Z647
Nearer transcript ids and distances:
  • ENST00000493294.2:184
  • ENST00000451807.7:282
  • ENST00000648263.1:483
view more...
Gene_name:LLGL scribble cell polarity complex component 1; discs large MAGUK scaffold protein 4
Gene_symbol:DLG4 LLGL1
Gene_synonyms:Lgl1 Mgl1 PSD-95 PSD95 SAP-90 SAP90
Gene_source:HGNC:2903 HGNC:6628



TATA-Box annotation

Distance to TSS:25
Nearest PromoterID:NM_001321077
Entrez ID:1742
Nearest Unigene:Hs.463928
Nearest Refseq:NM_001365
Nearest Ensembl:ENSG00000132535
Gene Name:LLGL scribble cell polarity complex component 1; discs large MAGUK scaffold protein 4
Gene Alias:PSD95|SAP-90|SAP90
Gene Type:protein-coding
CpG%:0.045455
GC%:0.573034
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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