TSS: Mm 16915.1: Difference between revisions

Revision as of 01:11, 15 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000124488.6 ENSMUST00000144957.2 NM_010067 uc008ika.2 AK029136 AK050403 BC087892
Distance:	0
GeneID:	13434
HGNC/MGI_ID:	MGI:1274787
UniProt_ID:	A0A0A6YWY7 O55055 Q5I0V6 Q8C7F0 Q8CE27

Gene_name:	tRNA aspartic acid methyltransferase 1
Gene_symbol:	Trdmt1
Gene_synonyms:	Dnmt2 Rnmt2
Gene_source:	MGI:1274787

TATA-Box annotation

Distance to TSS:	2
Nearest PromoterID:	NM_010067
Entrez ID:	13434
Nearest Unigene:	Mm.6979
Nearest Refseq:	NM_010067
Nearest Ensembl:	ENSMUSG00000026723
Gene Name:	tRNA aspartic acid methyltransferase 1
Gene Alias:	Dnmt2
Gene Description:	tRNA aspartic acid methyltransferase 1
Gene Type:	protein-coding
CpG%:	0.085
GC%:	0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|Rnmt2=
 |all_trans=ENSMUST00000124488.6:0 ENSMUST00000144957.2:0 NM_010067:0 uc008ika.2:0 AK029136:0 AK050403:0 BC087892:0 AF012129:1 ENSMUST00000028055.10:2 AF045889:5
 |chr=chr2
@@ Line 6: / Line 7: @@
 |distance_to_tss=2
 |end=13544673
+|end_of_center_position=13544663
 |entrez_id=13434
 |gc_percent=0.626866
-|gene_alias=Dnmt2|Rnmt2
+|gene_alias=Dnmt2
 |gene_description=tRNA aspartic acid methyltransferase 1
 |gene_id=13434
@@ Line 24: / Line 26: @@
 |species=mouse
 |start=13544651
+|start_of_center_position=13544662
 |strand=-
 |transcript_name=ENSMUST00000124488.6 ENSMUST00000144957.2 NM_010067 uc008ika.2 AK029136 AK050403 BC087892