TSS: Rfhg 209757.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
Line 16: Line 16:
|gene_description=homer scaffold protein 3
|gene_description=homer scaffold protein 3
|gene_id=
|gene_id=
|gene_name=HOMER3
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 21:36, 14 March 2025

Basic information about the TSS


TSS ID:rfhg_209757.1
Species:human
Chr:chr19
Start:18969794
End:18969820
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3048881,EH38E1944894)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-28590
    Nearest PromoterID:NM_004838
    Entrez ID:9454
    Nearest Unigene:Hs.720208
    Nearest Refseq:NM_004838
    Nearest Ensembl:ENSG00000051128
    Gene Name:
    Gene Alias:HOMER-3|VESL3
    Gene Type:protein-coding
    CpG%:0.038462
    GC%:0.481481
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):