TSS: Rfhg 210565.1: Difference between revisions
From referenceTSS
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|gene_description=CEBPA divergent transcript | |gene_description=CEBPA divergent transcript | ||
|gene_id=80054 | |gene_id=80054 | ||
|gene_name=CEBPA | |gene_name=CEBPA divergent transcript | ||
|gene_source=HGNC:25710 | |gene_source=HGNC:25710 | ||
|gene_symbol=CEBPA-DT | |gene_symbol=CEBPA-DT | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000592982 | |transcript_name=ENST00000592982.2 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_210565.1 | |tss_id=rfhg_210565.1 | ||
Latest revision as of 21:50, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3056247,EH38E1949613) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NR_026887 |
| Entrez ID: | 80054 |
| Nearest Unigene: | Hs.287521 |
| Nearest Refseq: | NR_026887 |
| Nearest Ensembl: | ENSG00000267296 |
| Gene Name: | CEBPA divergent transcript |
| Gene Alias: | CEBPA-AS1 |
| Gene Type: | ncRNA |
| CpG%: | 0.078431 |
| GC%: | 0.750000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.