TSS:Rfhg 215041.1

Basic information about the TSS

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TSS ID: rfhg_215041.1 Species: human Chr: chr19		Start: 50025518 End: 50025528 Strand: -
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3071060,EH38E1961475)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: LF384256:-20 MA619833:-20 GeneID: HGNC/MGI_ID: UniProt_ID: Nearer transcript ids and distances: ENST00000599138.5:79 ENST00000601341.5:116 ENST00000600259.5:116 AK303010:116 BC003546:128 AF514788:139 BC095449:139 ENST00000316763.8:146 ENST00000377011.6:146 ENST00000593919.5:146 ENST00000601324.1:146 NM_016440.4:146 NM_001025778.2:146 NM_001308420.3:146 AK225154:146 ENST00000424804.6:148 ENST00000602029.1:148 AK303529:148 ENST00000596814.5:149 ENST00000594948.5:149 ENST00000594090.5:149 AK294802:149 AK292918:149 AK311220:149 ENST00000594092.5:191 BC023556:191 AB031052:198 ENST00000600137.5:379 ENST00000597215.5:379 ENST00000596445.5:-408 ENST00000599538.5:-418 view more...

Gene_name: Gene_symbol: Gene_synonyms: Gene_source:

TATA-Box annotation

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Distance to TSS:	25
Nearest PromoterID:	NM_001025778
Entrez ID:	51231
Nearest Unigene:	Hs.443330
Nearest Refseq:	NM_016440
Nearest Ensembl:	ENSG00000105053
Gene Name:
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.100000
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENST00000599138.5:79 ENST00000601341.5:116 ENST00000600259.5:116 AK303010:116 BC003546:128 AF514788:139 BC095449:139 ENST00000316763.8:146 ENST00000377011.6:146 ENST00000593919.5:146 ENST00000601324.1:146 NM_016440.4:146 NM_001025778.2:146 NM_001308420.3:146 AK225154:146 ENST00000424804.6:148 ENST00000602029.1:148 AK303529:148 ENST00000596814.5:149 ENST00000594948.5:149 ENST00000594090.5:149 AK294802:149 AK292918:149 AK311220:149 ENST00000594092.5:191 BC023556:191 AB031052:198 ENST00000600137.5:379 ENST00000597215.5:379 ENST00000596445.5:-408 ENST00000599538.5:-418" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.