TSS: Rfhg 240751.1: Difference between revisions
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|gene_description=sex determining region Y | |gene_description=sex determining region Y | ||
|gene_id=6736 | |gene_id=6736 | ||
|gene_name= | |gene_name=sex determining region Y | ||
|gene_source=HGNC:11311 | |gene_source=HGNC:11311 | ||
|gene_symbol=SRY | |gene_symbol=SRY | ||
| Line 35: | Line 35: | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000383070.2 | |transcript_name=ENST00000383070.2 | ||
|tss_cluster_detected=2 | |tss_cluster_detected=2 | ||
|tss_id=rfhg_240751.1 | |tss_id=rfhg_240751.1 | ||
Latest revision as of 06:59, 15 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5|EPD | |||||||||||||
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| Protocol | CAGE|TSS_database | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4323278,EH38E2774761) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_003140 |
| Entrez ID: | 6736 |
| Nearest Unigene: | Hs.1992 |
| Nearest Refseq: | NM_003140 |
| Nearest Ensembl: | ENSG00000184895 |
| Gene Name: | sex determining region Y |
| Gene Alias: | SRXX1|SRXY1|TDF|TDY |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.454545 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "L10101:-12 BC074923:36 BC074924:36 EU446863:74 MH972534:74 MH972535:74 MH972536:74 MH972537:74 MK011510:74 MK011511:74 MK011512:74 MK011513:74 MK011514:74 MK011515:74 MK011516:74 MK011519:74 AB464705:74 MK011517:74 MK011518:74 MH972533:74 S53156:142 S56543:239" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.