TSS: Rfhg 31161.1: Difference between revisions
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|gene_description=long intergenic non-protein coding RNA 1191 | |gene_description=long intergenic non-protein coding RNA 1191 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 09:13, 15 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3166661,EH38E2026347) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -19 |
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| Nearest PromoterID: | NR_148508 |
| Entrez ID: | 440900 |
| Nearest Unigene: | Hs.662205 |
| Nearest Refseq: | NR_034128 |
| Nearest Ensembl: | ENSG00000234199 |
| Gene Name: | |
| Gene Alias: | VIN|lnc-ACTR3 |
| Gene Type: | ncRNA |
| CpG%: | 0.157895 |
| GC%: | 0.650000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |