TSS: Hg 100075.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=-196 |entrez_id=6619 |gc_percent=0.651741 |gene_alias=PTFbeta|SNAP50 |gene_description=small nuclear RNA activating complex pol...") |
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{{TSSDetail | {{TSSDetail | ||
|SNAP50= | |||
|chr=chr9 | |||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance= | |||
|distance_to_tss=-196 | |distance_to_tss=-196 | ||
|end=15422600 | |||
|entrez_id=6619 | |entrez_id=6619 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_003084 | |nearest_refseq=NM_003084 | ||
|nearest_unigene=Hs.546299 | |nearest_unigene=Hs.546299 | ||
|num_trans=0 | |||
|species=human | |||
|start=15422576 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100075.1 | |tss_id=hg_100075.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:00, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -196 |
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| Nearest PromoterID: | NM_001039697 |
| Entrez ID: | 6619 |
| Nearest Unigene: | Hs.546299 |
| Nearest Refseq: | NM_003084 |
| Nearest Ensembl: | ENSG00000164975 |
| Gene Name: | SNAPC3 |
| Gene Alias: | PTFbeta |
| Gene Description: | small nuclear RNA activating complex polypeptide 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |