TSS: Rfhg 62186.1: Difference between revisions

Latest revision as of 18:59, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_62186.1
Species:	human
Chr:	chr4

Start:	136921434
End:	136921435
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000512039.1:52
GeneID:	105377441
HGNC/MGI_ID:	HGNC:53500
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	long intergenic non-protein coding RNA 2511
Gene_symbol:	LINC02511
Gene_synonyms:
Gene_source:	HGNC:53500

TATA-Box annotation

Distance to TSS:	-272322
Nearest PromoterID:	NR_134640
Entrez ID:	729307
Nearest Unigene:	Hs.552764
Nearest Refseq:	NR_134640
Nearest Ensembl:
Gene Name:	long intergenic non-protein coding RNA 2511
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=long intergenic non-protein coding RNA 2510
 |gene_id=105377441
-|gene_name=LINC02510
+|gene_name=long intergenic non-protein coding RNA 2511
 |gene_source=HGNC:53500
 |gene_symbol=LINC02511