TSS: Rfhg 65075.1: Difference between revisions

Latest revision as of 19:54, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_65075.1
Species:	human
Chr:	chr4

Start:	186555501
End:	186555501
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3666053,EH38E2350434)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000307161.5:-66 BC126297:-66 BC126299:-66
GeneID:	4543
HGNC/MGI_ID:	HGNC:7463
UniProt_ID:	P48039
Nearer transcript ids and distances:	U14108:104 BC074946:118 BC074947:118 HQ258378:133 KJ891655:133 KR711668:133 KR711669:133 AB464620:134 EU432127:136 ENST00000509111.2:173 view more...

Gene_name:	melatonin receptor 1A
Gene_symbol:	MTNR1A
Gene_synonyms:	MEL-1A-R
Gene_source:	HGNC:7463

TATA-Box annotation

Distance to TSS:	66
Nearest PromoterID:	NM_005958
Entrez ID:	4543
Nearest Unigene:	Hs.243467
Nearest Refseq:	NM_005958
Nearest Ensembl:	ENSG00000168412
Gene Name:	melatonin receptor 1A
Gene Alias:	MEL-1A-R\|MT1
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=melatonin receptor 1A
 |gene_id=4543
-|gene_name=MTNR1A
+|gene_name=melatonin receptor 1A
 |gene_source=HGNC:7463
 |gene_symbol=MTNR1A
@@ Line 35: / Line 35: @@
 |strand=-
 |tata_box=
-|transcript_name=ENST00000307161.5 NM_005958.4 BC126297 BC126299
+|transcript_name=ENST00000307161.5 BC126297 BC126299
 |tss_cluster_detected=1
 |tss_id=rfhg_65075.1