TSS: Rfhg 68522.1: Difference between revisions

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|gene_description=adenylate kinase 6
|gene_description=adenylate kinase 6
|gene_id=102157402 6880
|gene_id=102157402 6880
|gene_name=AK6
|gene_name=TATA-box binding protein associated factor 9; adenylate kinase 6
|gene_source=HGNC:11542 HGNC:49151
|gene_source=HGNC:11542 HGNC:49151
|gene_symbol=AK6 TAF9
|gene_symbol=AK6 TAF9
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|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENST00000380822.9 ENST00000502819.5 ENST00000512561.5 ENST00000618980.1 ENST00000217893.10 ENST00000503245.5 ENST00000512152.5 NM_016283.5 NM_003187.5 BC007349 BC007426 AF151895 AJ878880 AJ878881 KJ905933 EU831966 EU832059 U21858 BC003400
|transcript_name=ENST00000380822.9 ENST00000502819.5 ENST00000512561.5 ENST00000618980.1 ENST00000217893.10 ENST00000503245.5 ENST00000512152.5 BC007349 BC007426 AF151895 AJ878880 AJ878881 EU831966 EU832059 U21858 BC003400
|tss_cluster_detected=11
|tss_cluster_detected=11
|tss_id=rfhg_68522.1
|tss_id=rfhg_68522.1

Latest revision as of 20:59, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_68522.1
Species:human
Chr:chr5
Start:69369470
End:69369554
Strand:-
Source datasetsPRJNA401781|PRJNA548673|PRJNA4843412|DRA013844|PRJNA615891
|PRJDB5282|PRJNA597322
ProtocolCAGE|oligo_capping|ReCappable-seq|NETCAGE|TIF-seq2|RAMPAGE
|C1CAGE|SLIC_CAGE|STRIPE-seq
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS,CTCF-bound (EH38D3714889,EH38E2380273)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000380822.9:0
ENST00000502819.5:0
ENST00000512561.5:0
ENST00000618980.1:0
ENST00000217893.10:0
ENST00000503245.5:0
ENST00000512152.5:0
BC007349:0
BC007426:0
AF151895:0
AJ878880:0
AJ878881:0
EU831966:0
EU832059:0
U21858:0
BC003400:0
GeneID:102157402 6880
HGNC/MGI_ID:HGNC:11542 HGNC:49151
UniProt_ID:A0A087WVD7 A0A087WY94 D6RDH4 D6RIE8 D6RIY1 Q16594 Q9Y3D8
Nearer transcript ids and distances:
  • ENST00000508954.3:5
  • ENST00000509462.5:154
  • NM_001015891.2:-270
  • NM_001015892.2:-270
  • ENST00000380818.7:-459
  • ENST00000328663.8:-459
  • AF110777:-459
view more...
Gene_name:TATA-box binding protein associated factor 9; adenylate kinase 6
Gene_symbol:AK6 TAF9
Gene_synonyms:AD-004 CGI-137 CINAP MGC1603 MGC3647 MGC5067 TAFII31 TAFII32 TAFIID32
Gene_source:HGNC:11542 HGNC:49151



TATA-Box annotation

Distance to TSS:8
Nearest PromoterID:NM_016283
Entrez ID:102157402
Nearest Unigene:Hs.653163
Nearest Refseq:NM_016283
Nearest Ensembl:ENSG00000085231
Gene Name:TATA-box binding protein associated factor 9; adenylate kinase 6
Gene Alias:AD-004|CGI-137|CINAP|CIP|hCINAP
Gene Type:protein-coding
CpG%:0.119048
GC%:0.670588
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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