TSS: Rfhg 81401.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description=major histocompatibility complex, class II, DP beta 2 (pseudogene) | |gene_description=major histocompatibility complex, class II, DP beta 2 (pseudogene) | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 01:01, 16 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | dELS (EH38D3832838,EH38E2460384) |
|---|---|
| Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 4137 |
|---|---|
| Nearest PromoterID: | NR_001435 |
| Entrez ID: | 3116 |
| Nearest Unigene: | Hs.665450 |
| Nearest Refseq: | NR_001435 |
| Nearest Ensembl: | ENSG00000224557 |
| Gene Name: | |
| Gene Alias: | DP2B|DPB2|DPbeta2|HLA-DP2B |
| Gene Type: | pseudo |
| CpG%: | 0.045455 |
| GC%: | 0.565217 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |