TSS: Hg 102881.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=113689 |entrez_id=9442 |gc_percent=0.462687 |gene_alias=CRAP34|CRSP34|CRSP8|MED3|TRAP37 |gene_description=mediator complex subu...") |
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{{TSSDetail | {{TSSDetail | ||
|CRSP34= | |||
|CRSP8= | |||
|MED3= | |||
|TRAP37= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=113689 | |distance_to_tss=113689 | ||
|end=131966200 | |||
|entrez_id=9442 | |entrez_id=9442 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_004269 | |nearest_refseq=NM_004269 | ||
|nearest_unigene=Hs.374262 | |nearest_unigene=Hs.374262 | ||
|num_trans=0 | |||
|species=human | |||
|start=131966196 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102881.1 | |tss_id=hg_102881.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:45, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 113689 |
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| Nearest PromoterID: | NM_001253882 |
| Entrez ID: | 9442 |
| Nearest Unigene: | Hs.374262 |
| Nearest Refseq: | NM_004269 |
| Nearest Ensembl: | ENSG00000160563 |
| Gene Name: | MED27 |
| Gene Alias: | CRAP34 |
| Gene Description: | mediator complex subunit 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |