TSS: Hg 102889.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=85204 |entrez_id=23064 |gc_percent=0.472637 |gene_alias=ALS4|AOA2|SCAR1|bA479K20.2 |gene_description=senataxin |gene_name=SETX...") |
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{{TSSDetail | {{TSSDetail | ||
|AOA2= | |||
|SCAR1= | |||
|bA479K20.2= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=85204 | |distance_to_tss=85204 | ||
|end=132269786 | |||
|entrez_id=23064 | |entrez_id=23064 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_015046 | |nearest_refseq=NM_015046 | ||
|nearest_unigene=Hs.460317 | |nearest_unigene=Hs.460317 | ||
|num_trans=0 | |||
|species=human | |||
|start=132269775 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102889.1 | |tss_id=hg_102889.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:45, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 85204 |
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| Nearest PromoterID: | NM_015046 |
| Entrez ID: | 23064 |
| Nearest Unigene: | Hs.460317 |
| Nearest Refseq: | NM_015046 |
| Nearest Ensembl: | ENSG00000107290 |
| Gene Name: | SETX |
| Gene Alias: | ALS4 |
| Gene Description: | senataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |