TSS: Rfmm 23171.1: Difference between revisions

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|gene_description=
|gene_description=
|gene_id=407243
|gene_id=407243
|gene_name=Gm31852
|gene_name=plasmanylethanolamine desaturase 1
|gene_source=MGI:2142624
|gene_source=MGI:2142624
|gene_symbol=Peds1
|gene_symbol=Peds1

Latest revision as of 14:13, 19 March 2025

Basic information about the TSS


TSS ID:rfmm_23171.1
Species:mouse
Chr:chr2
Start:167485492
End:167485503
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK213035:10
GeneID:407243
HGNC/MGI_ID:MGI:2142624
UniProt_ID:
Nearer transcript ids and distances:
  • AK197493:24
  • AK187561:25
  • AK199682:25
  • AK180745:-46
  • AK190120:-112
  • AK188596:-366
  • AK197639:-366
  • AK193906:371
  • AK177731:371
  • AK187458:-416
  • AK216526:-494
view more...
Gene_name:plasmanylethanolamine desaturase 1
Gene_symbol:Peds1
Gene_synonyms:Tmem189
Gene_source:MGI:2142624



TATA-Box annotation


Distance to TSS:11192
Nearest PromoterID:XR_375265.5
Entrez ID:Gm31852
Nearest Unigene:XR_375265
Nearest Refseq:
Nearest Ensembl:
Gene Name:plasmanylethanolamine desaturase 1
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.