TSS: Hg 102911.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-23336 |entrez_id=11092 |gc_percent=0.60199 |gene_alias=C9orf9|Mast |gene_description=sperm acrosome associated 9 |gene_name=SP...") |
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{{TSSDetail | {{TSSDetail | ||
|Mast= | |||
|chr=chr9 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance= | |||
|distance_to_tss=-23336 | |distance_to_tss=-23336 | ||
|end=132854987 | |||
|entrez_id=11092 | |entrez_id=11092 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_018956 | |nearest_refseq=NM_018956 | ||
|nearest_unigene=Hs.62595 | |nearest_unigene=Hs.62595 | ||
|num_trans=0 | |||
|species=human | |||
|start=132854980 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102911.1 | |tss_id=hg_102911.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:46, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -23336 |
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| Nearest PromoterID: | NM_001316898 |
| Entrez ID: | 11092 |
| Nearest Unigene: | Hs.62595 |
| Nearest Refseq: | NM_018956 |
| Nearest Ensembl: | ENSG00000165698 |
| Gene Name: | SPACA9 |
| Gene Alias: | C9orf9 |
| Gene Description: | sperm acrosome associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |