TSS: Hg 100089.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-211 |entrez_id=203238 |gc_percent=0.681592 |gene_alias=C9orf93|bA536D16.1|bA778P13.1 |gene_description=coiled-coil domain cont...") |
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{{TSSDetail | {{TSSDetail | ||
|bA536D16.1= | |||
|bA778P13.1= | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance= | |||
|distance_to_tss=-211 | |distance_to_tss=-211 | ||
|end=15552801 | |||
|entrez_id=203238 | |entrez_id=203238 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_173550 | |nearest_refseq=NM_173550 | ||
|nearest_unigene=Hs.17267 | |nearest_unigene=Hs.17267 | ||
|num_trans=0 | |||
|species=human | |||
|start=15552790 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100089.1 | |tss_id=hg_100089.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:01, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -211 |
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| Nearest PromoterID: | NM_173550 |
| Entrez ID: | 203238 |
| Nearest Unigene: | Hs.17267 |
| Nearest Refseq: | NM_173550 |
| Nearest Ensembl: | ENSG00000164989 |
| Gene Name: | CCDC171 |
| Gene Alias: | C9orf93 |
| Gene Description: | coiled-coil domain containing 171 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |