TSS: Rfmm 52536.1: Difference between revisions

Latest revision as of 22:20, 19 March 2025

Basic information about the TSS

TSS ID:	rfmm_52536.1
Species:	mouse
Chr:	chr5

Start:	146522033
End:	146522033
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2810544,EM10E1159414)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000036211.8:-16 AK140298:-16
GeneID:	14738
HGNC/MGI_ID:	MGI:101909
UniProt_ID:	P35412
Nearer transcript ids and distances:	ENSMUST00000197825.2:380 ENSMUST00000197431.2:391 D21061:391 ENSMUST00000200112.2:404 view more...

Gene_name:	G-protein coupled receptor 12
Gene_symbol:	Gpr12
Gene_synonyms:	Gpcr01 Gpcr12 Gpcr20
Gene_source:	MGI:101909

TATA-Box annotation

Distance to TSS:	16
Nearest PromoterID:	NM_001359058.1
Entrez ID:	Gpr12
Nearest Unigene:	XM_030254133
Nearest Refseq:
Nearest Ensembl:
Gene Name:	G-protein coupled receptor 12
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=
 |gene_id=14738
-|gene_name=Gpr12
+|gene_name=G-protein coupled receptor 12
 |gene_source=MGI:101909
 |gene_symbol=Gpr12
@@ Line 35: / Line 35: @@
 |strand=-
 |tata_box=
-|transcript_name=ENSMUST00000036211.8 NM_001359055.1 NM_001359056.1 NM_001010941.2 NM_001359057.1 NM_001359058.1 AK140298
+|transcript_name=ENSMUST00000036211.8 AK140298
 |tss_cluster_detected=1
 |tss_id=rfmm_52536.1