TSS: Rfmm 69844.1: Difference between revisions

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Latest revision as of 03:07, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_69844.1
Species:mouse
Chr:chr7
Start:81642417
End:81642427
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2875887,EM10E1187231)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF202739:-66
MA438316:-66
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000026096.10:362
  • NM_007562.2:370
  • AK087567:377
  • BC165999:379
  • U88064:423
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-375
Nearest PromoterID:NM_007562.2
Entrez ID:Bnc1
Nearest Unigene:XM_011250782
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):