TSS: Rfmm 77872.1: Difference between revisions

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Latest revision as of 05:20, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_77872.1
Species:mouse
Chr:chr8
Start:41509610
End:41509620
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2907622,EM10E1200387)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-1782
    Nearest PromoterID:NM_001005864.3
    Entrez ID:Mtus1
    Nearest Unigene:XR_004934738
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.100000
    GC%:0.727273
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):