TSS: Rfmm 84614.1: Difference between revisions

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|gene_description=
|gene_description=
|gene_id=235033
|gene_id=235033
|gene_name=Rdh8
|gene_name=retinol dehydrogenase 8
|gene_source=MGI:2685028
|gene_source=MGI:2685028
|gene_symbol=Rdh8
|gene_symbol=Rdh8
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENSMUST00000066387.6 NM_001030290.2 BC148618 BC153184
|transcript_name=ENSMUST00000066387.6 BC148618 BC153184
|tss_cluster_detected=2
|tss_cluster_detected=2
|tss_id=rfmm_84614.1
|tss_id=rfmm_84614.1

Latest revision as of 07:12, 20 March 2025

Basic information about the TSS

TSS ID:rfmm_84614.1
Species:mouse
Chr:chr9
Start:20729787
End:20729802
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENSMUST00000066387.6:0
BC148618:0
BC153184:0
GeneID:235033
HGNC/MGI_ID:MGI:2685028
UniProt_ID:D3Z6W3
Nearer transcript ids and distances:
    Gene_name:retinol dehydrogenase 8
    Gene_symbol:Rdh8
    Gene_synonyms:LOC235033 prRDH
    Gene_source:MGI:2685028



    TATA-Box annotation

    Distance to TSS:4
    Nearest PromoterID:NM_001030290.2
    Entrez ID:Rdh8
    Nearest Unigene:NM_001030290
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:retinol dehydrogenase 8
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.
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