TSS: Rfmm 99514.1: Difference between revisions

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Line 16: Line 16:
|gene_description=
|gene_description=
|gene_id=71832
|gene_id=71832
|gene_name=Csl
|gene_name=citrate synthase like; small muscle protein, X-linked
|gene_source=MGI:1913356 MGI:1919082
|gene_source=MGI:1913356 MGI:1919082
|gene_symbol=Csl Smpx
|gene_symbol=Csl Smpx
Line 35: Line 35:
|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENSMUST00000056085.6 NM_027945.3 AK005713
|transcript_name=ENSMUST00000056085.6 AK005713
|tss_cluster_detected=1
|tss_cluster_detected=1
|tss_id=rfmm_99514.1
|tss_id=rfmm_99514.1

Latest revision as of 11:22, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_99514.1
Species:mouse
Chr:chr10
Start:99595456
End:99595463
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000056085.6:-57
AK005713:-57
GeneID:71832
HGNC/MGI_ID:MGI:1913356 MGI:1919082
UniProt_ID:Q80X68 Q9DAM4
Nearer transcript ids and distances:
  • AK161295:130
  • BC050750:138
view more...
Gene_name:citrate synthase like; small muscle protein, X-linked
Gene_symbol:Csl Smpx
Gene_synonyms:1010001C09Rik 1700007H16Rik Csl chisel
Gene_source:MGI:1913356 MGI:1919082



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_027945.3
Entrez ID:Csl
Nearest Unigene:NM_027945
Nearest Refseq:
Nearest Ensembl:
Gene Name:citrate synthase like; small muscle protein, X-linked
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.250000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.