TSS: Mm 41872.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENSMUST00000096452.5:-47 NM_001166581:-47 uc008ykm.2:-47 AK164034:-47 |chr=chr5 |cpg_percent=0.155 |distance=-47 |distance_to_tss=52 |end=104508410 |ent...")
 
No edit summary
Line 6: Line 6:
|distance_to_tss=52
|distance_to_tss=52
|end=104508410
|end=104508410
|end_of_center_position=104508405
|entrez_id=100042165
|entrez_id=100042165
|gc_percent=0.716418
|gc_percent=0.716418
Line 24: Line 25:
|species=mouse
|species=mouse
|start=104508398
|start=104508398
|start_of_center_position=104508404
|strand=+
|strand=+
|transcript_name=ENSMUST00000096452.5 NM_001166581 uc008ykm.2 AK164034
|transcript_name=ENSMUST00000096452.5 NM_001166581 uc008ykm.2 AK164034

Revision as of 23:58, 11 May 2019

Basic information about the TSS


TSS ID:mm_41872.1
Species:mouse
Chr:chr5
Start:104508398
End:104508410
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000096452.5 NM_001166581 uc008ykm.2 AK164034
Distance:-47
GeneID:100042165
HGNC/MGI_ID:MGI:3040669
UniProt_ID:E9Q5E2 Q3TPY8
Gene_name:cDNA sequence BC005561
Gene_symbol:BC005561
Gene_synonyms:
Gene_source:MGI:3040669



TATA-Box annotation


Distance to TSS:52
Nearest PromoterID:NM_001166581
Entrez ID:100042165
Nearest Unigene:Mm.482189
Nearest Refseq:NM_001166581
Nearest Ensembl:ENSMUSG00000079065
Gene Name:cDNA sequence BC005561
Gene Alias:-
Gene Description:cDNA sequence BC005561
Gene Type:protein-coding
CpG%:0.155
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.