TSS: Mm 4230.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000111286.8:8 AK154983:8 NM_027893:82 NM_001122680:82 uc007dof.2:82 uc011wwc.1:82 ENSMUST00000006578.9:261 ENSMUST00000094325.4:264 AK004821:26...") |
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{{TSSDetail | {{TSSDetail | ||
|Prr4= | |||
|Pvrl4= | |||
|all_trans=ENSMUST00000111286.8:8 AK154983:8 NM_027893:82 NM_001122680:82 uc007dof.2:82 uc011wwc.1:82 ENSMUST00000006578.9:261 ENSMUST00000094325.4:264 AK004821:264 AK028479:307 BC024948:326 | |all_trans=ENSMUST00000111286.8:8 AK154983:8 NM_027893:82 NM_001122680:82 uc007dof.2:82 uc011wwc.1:82 ENSMUST00000006578.9:261 ENSMUST00000094325.4:264 AK004821:264 AK028479:307 BC024948:326 | ||
|chr=chr1 | |chr=chr1 | ||
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|distance_to_tss=-101 | |distance_to_tss=-101 | ||
|end=171370091 | |end=171370091 | ||
|end_of_center_position=171370072 | |||
|entrez_id=71740 | |entrez_id=71740 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=1200017F15Rik | |gene_alias=1200017F15Rik | ||
|gene_description=nectin cell adhesion molecule 4 | |gene_description=nectin cell adhesion molecule 4 | ||
|gene_id=71740 | |gene_id=71740 | ||
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|species=mouse | |species=mouse | ||
|start=171370052 | |start=171370052 | ||
|start_of_center_position=171370071 | |||
|strand=+ | |strand=+ | ||
|tata_box="45(TTCTCTTTAAGG,-,0.00)" | |tata_box="45(TTCTCTTTAAGG,-,0.00)" | ||
Revision as of 04:53, 11 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -101 |
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| Nearest PromoterID: | NM_027893 |
| Entrez ID: | 71740 |
| Nearest Unigene: | Mm.263414 |
| Nearest Refseq: | NM_027893 |
| Nearest Ensembl: | ENSMUSG00000006411 |
| Gene Name: | poliovirus receptor-related 4 |
| Gene Alias: | 1200017F15Rik |
| Gene Description: | nectin cell adhesion molecule 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "45(TTCTCTTTAAGG,-,0.00)" |
TSS expression
Expression data not found.