TSS: Hg 103079.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=101 |entrez_id=2219 |gc_percent=0.572139 |gene_alias=FCNM |gene_description=ficolin 1 |gene_name=FCN1 |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000616356.4:0 uc064wxu.1:0 CR749452:0 BC020635:0 AK314867:0 KJ896809:0 DQ891426:1 DQ894436:1 D83920:8 NM_002003:-28 ENST00000371806.3:-31 uc004cfi.4:-31 S80990:-31 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |||
|distance_to_tss=101 | |distance_to_tss=101 | ||
|end=134917932 | |||
|entrez_id=2219 | |entrez_id=2219 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=FCNM | |gene_alias=FCNM | ||
|gene_description=ficolin 1 | |gene_description=ficolin 1 | ||
|gene_name=FCN1 | |gene_id=2219 | ||
|gene_name=ficolin 1 | |||
|gene_source=HGNC:3623 | |||
|gene_symbol=FCN1 | |||
|gene_synonyms=FCNM | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:3623 | |||
|nearest_ensembl=ENSG00000085265 | |nearest_ensembl=ENSG00000085265 | ||
|nearest_promoter_id=NM_002003 | |nearest_promoter_id=NM_002003 | ||
|nearest_refseq=NM_002003 | |nearest_refseq=NM_002003 | ||
|nearest_unigene=Hs.440898 | |nearest_unigene=Hs.440898 | ||
|num_trans=13 | |||
|species=human | |||
|start=134917872 | |||
|strand=- | |||
|transcript_name=ENST00000616356.4 uc064wxu.1 CR749452 BC020635 AK314867 KJ896809 | |||
|tss_classification=no | |||
|tss_id=hg_103079.1 | |tss_id=hg_103079.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A087WVE2 Q68DD1 | |||
}} | }} | ||
Revision as of 19:54, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 101 |
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| Nearest PromoterID: | NM_002003 |
| Entrez ID: | 2219 |
| Nearest Unigene: | Hs.440898 |
| Nearest Refseq: | NM_002003 |
| Nearest Ensembl: | ENSG00000085265 |
| Gene Name: | ficolin 1 |
| Gene Alias: | FCNM |
| Gene Description: | ficolin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.