TSS: Mm 76484.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr8 |cpg_percent=0.005 |distance= |distance_to_tss=-4166 |end=85559439 |entrez_id=56445 |gc_percent=0.462687 |gene_alias=1500017M13Rik|2010206B19Rik|DNAJ|DNJ...") |
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{{TSSDetail | {{TSSDetail | ||
|2010206B19Rik= | |||
|DNAJ= | |||
|DNJ3= | |||
|Dnaj3= | |||
|HIRIP4= | |||
|PRO3015= | |||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 11: | ||
|distance_to_tss=-4166 | |distance_to_tss=-4166 | ||
|end=85559439 | |end=85559439 | ||
|end_of_center_position=85559438 | |||
|entrez_id=56445 | |entrez_id=56445 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=1500017M13Rik | |gene_alias=1500017M13Rik | ||
|gene_description=DnaJ heat shock protein family (Hsp40) member A2 | |gene_description=DnaJ heat shock protein family (Hsp40) member A2 | ||
|gene_name=Dnaja2 | |gene_name=Dnaja2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|mDj3= | |||
|nearest_ensembl=ENSMUSG00000031701 | |nearest_ensembl=ENSMUSG00000031701 | ||
|nearest_promoter_id=NM_019794 | |nearest_promoter_id=NM_019794 | ||
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|species=mouse | |species=mouse | ||
|start=85559435 | |start=85559435 | ||
|start_of_center_position=85559437 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 16:46, 13 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -4166 |
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| Nearest PromoterID: | NM_019794 |
| Entrez ID: | 56445 |
| Nearest Unigene: | Mm.475573 |
| Nearest Refseq: | NM_019794 |
| Nearest Ensembl: | ENSMUSG00000031701 |
| Gene Name: | Dnaja2 |
| Gene Alias: | 1500017M13Rik |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |