TSS: Mm 78132.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=AK034516:0 AK038619:-23 BC043448:-28 ENSMUST00000176142.7:-44 AK149161:-59 ENSMUST00000175820.7:-66 AK157146:-66 ENSMUST00000043911.7:-82 NM_175687:-82...")
 
No edit summary
Line 6: Line 6:
|distance_to_tss=90
|distance_to_tss=90
|end=20868741
|end=20868741
|end_of_center_position=20868733
|entrez_id=319278
|entrez_id=319278
|gc_percent=0.701493
|gc_percent=0.701493
Line 24: Line 25:
|species=mouse
|species=mouse
|start=20868723
|start=20868723
|start_of_center_position=20868732
|strand=+
|strand=+
|transcript_name=AK034516
|transcript_name=AK034516

Revision as of 21:29, 13 May 2019

Basic information about the TSS


TSS ID:mm_78132.1
Species:mouse
Chr:chr9
Start:20868723
End:20868741
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK034516
Distance:0
GeneID:319278
HGNC/MGI_ID:MGI:2441788
UniProt_ID:
Gene_name:RIKEN cDNA A230050P20 gene
Gene_symbol:A230050P20Rik
Gene_synonyms:
Gene_source:MGI:2441788



TATA-Box annotation


Distance to TSS:90
Nearest PromoterID:NM_175687
Entrez ID:319278
Nearest Unigene:Mm.249932
Nearest Refseq:NM_175687
Nearest Ensembl:ENSMUSG00000038884
Gene Name:RIKEN cDNA A230050P20 gene
Gene Alias:RyDEN
Gene Description:RIKEN cDNA A230050P20 gene
Gene Type:protein-coding
CpG%:0.125
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.