TSS: Mm 84375.1: Difference between revisions

Revision as of 02:11, 14 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Transcript_name:	ENSMUST00000036615.5 NM_021345 uc009qcp.2 BC057023 BC031755 AK051735 AK159494 AK050556 AK052865
Distance:	0
GeneID:	57874
HGNC/MGI_ID:	MGI:1889341
UniProt_ID:	Q8K2C9

Gene_name:	3-hydroxyacyl-CoA dehydratase 3
Gene_symbol:	Hacd3
Gene_synonyms:	B-ind1 Hspc121 Ptplad1
Gene_source:	MGI:1889341

TATA-Box annotation

Distance to TSS:	36
Nearest PromoterID:	NM_021345
Entrez ID:	57874
Nearest Unigene:	Mm.308180
Nearest Refseq:	NM_021345
Nearest Ensembl:	ENSMUSG00000033629
Gene Name:	3-hydroxyacyl-CoA dehydratase 3
Gene Alias:	4930523M17Rik
Gene Description:	3-hydroxyacyl-CoA dehydratase 3
Gene Type:	protein-coding
CpG%:	0.125
GC%:	0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|AW742319=
+|B-ind1=
+|Hcad3=
+|Hspc121=
+|Ptplad1=
 |all_trans=ENSMUST00000036615.5:0 NM_021345:0 uc009qcp.2:0 BC057023:0 BC031755:0 AK051735:0 AK159494:0 AK050556:0 AK052865:0 Z97207:103
 |chr=chr9
@@ Line 6: / Line 11: @@
 |distance_to_tss=36
 |end=65021717
+|end_of_center_position=65021682
 |entrez_id=57874
 |gc_percent=0.726368
-|gene_alias=4930523M17Rik|AW742319|B-ind1|Hcad3|Hspc121|Ptplad1
+|gene_alias=4930523M17Rik
 |gene_description=3-hydroxyacyl-CoA dehydratase 3
 |gene_id=57874
@@ Line 24: / Line 30: @@
 |species=mouse
 |start=65021645
+|start_of_center_position=65021681
 |strand=-
 |transcript_name=ENSMUST00000036615.5 NM_021345 uc009qcp.2 BC057023 BC031755 AK051735 AK159494 AK050556 AK052865