TSS: Hg 114584.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|distance_to_tss=-1
|distance_to_tss=-1
|end=61430148
|end=61430148
|end_of_center_position=61430125
|entrez_id=54949
|entrez_id=54949
|gc_percent=0.681592
|gc_percent=0.681592
|gene_alias=C11orf79|PGL2|SDH5
|gene_alias=C11orf79
|gene_description=succinate dehydrogenase complex assembly factor 2
|gene_description=succinate dehydrogenase complex assembly factor 2
|gene_id=220004 54949
|gene_id=220004 54949
Line 26: Line 27:
|species=human
|species=human
|start=61430100
|start=61430100
|start_of_center_position=61430124
|strand=+
|strand=+
|transcript_name=ENST00000542074.1 ENST00000536670.5 ENST00000623232.1 ENST00000534878.5 ENST00000538594.5 ENST00000359614.9 ENST00000537782.5 ENST00000544801.5 ENST00000536250.1 ENST00000544880.1 ENST00000543265.1 NM_017841 uc058ccr.1 uc058ccs.1 uc058cct.1 uc058ccu.1 uc058ccv.1 uc058ccw.1 uc058ccx.1 uc058ccy.1 uc058ccz.1 uc058cda.1 uc058cdb.1 BX648946 AK000494 BC002331 JF432739 KJ904784
|transcript_name=ENST00000542074.1 ENST00000536670.5 ENST00000623232.1 ENST00000534878.5 ENST00000538594.5 ENST00000359614.9 ENST00000537782.5 ENST00000544801.5 ENST00000536250.1 ENST00000544880.1 ENST00000543265.1 NM_017841 uc058ccr.1 uc058ccs.1 uc058cct.1 uc058ccu.1 uc058ccv.1 uc058ccw.1 uc058ccx.1 uc058ccy.1 uc058ccz.1 uc058cda.1 uc058cdb.1 BX648946 AK000494 BC002331 JF432739 KJ904784

Revision as of 17:16, 12 May 2019

Basic information about the TSS

TSS ID:hg_114584.1
Species:human
Chr:chr11
Start:61430100
End:61430148
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000542074.1 ENST00000536670.5 ENST00000623232.1 ENST00000534878.5 ENST00000538594.5 ENST00000359614.9 ENST00000537782.5 ENST00000544801.5 ENST00000536250.1 ENST00000544880.1 ENST00000543265.1 NM_017841 uc058ccr.1 uc058ccs.1 uc058cct.1 uc058ccu.1 uc058ccv.1 uc058ccw.1 uc058ccx.1 uc058ccy.1 uc058ccz.1 uc058cda.1 uc058cdb.1 BX648946 AK000494 BC002331 JF432739 KJ904784
Distance:0
GeneID:220004 54949
HGNC/MGI_ID:HGNC:26034 HGNC:28869
UniProt_ID:F5GXW4 F5H4T4 F5H8E2 F8W679 M0QY91 M0QYN2 M0R060 Q9NX18
Gene_name:protein phosphatase 1 regulatory subunit 32; succinate dehydrogenase complex assembly factor 2
Gene_symbol:PPP1R32 SDHAF2
Gene_synonyms:FLJ20487 FLJ32771 IIIG9 SDH5
Gene_source:HGNC:26034 HGNC:28869



TATA-Box annotation

Distance to TSS:-1
Nearest PromoterID:NM_017841
Entrez ID:54949
Nearest Unigene:Hs.313247
Nearest Refseq:NM_017841
Nearest Ensembl:ENSG00000167985
Gene Name:protein phosphatase 1 regulatory subunit 32; succinate dehydrogenase complex assembly factor 2
Gene Alias:C11orf79
Gene Description:succinate dehydrogenase complex assembly factor 2
Gene Type:protein-coding
CpG%:0.115
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Hg_114584.1&oldid=849385"