TSS: Mm 90725.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK139311:24 |chr=chr10 |cpg_percent=0.02 |distance=24 |distance_to_tss=9143 |end=5185578 |entrez_id=64009 |gc_percent=0.457711 |gene_alias=8B|A330049M09...") |
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{{TSSDetail | {{TSSDetail | ||
|A330049M09Rik= | |||
|BE692247= | |||
|C130039F11Rik= | |||
|CPG2= | |||
|Myne1= | |||
|all_trans=AK139311:24 | |all_trans=AK139311:24 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=9143 | |distance_to_tss=9143 | ||
|end=5185578 | |end=5185578 | ||
|end_of_center_position=5185564 | |||
|entrez_id=64009 | |entrez_id=64009 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=8B | |gene_alias=8B | ||
|gene_description="spectrin repeat containing, nuclear envelope 1" | |gene_description="spectrin repeat containing, nuclear envelope 1" | ||
|gene_name=Syne1 | |gene_name=Syne1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|mKIAA1756= | |||
|myne-1= | |||
|nearest_ensembl=ENSMUSG00000096054 | |nearest_ensembl=ENSMUSG00000096054 | ||
|nearest_promoter_id=NM_001079686 | |nearest_promoter_id=NM_001079686 | ||
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|species=mouse | |species=mouse | ||
|start=5185549 | |start=5185549 | ||
|start_of_center_position=5185563 | |||
|strand=- | |strand=- | ||
|transcript_name=AK139311 | |transcript_name=AK139311 | ||
Revision as of 07:51, 11 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9143 |
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| Nearest PromoterID: | NM_001079686 |
| Entrez ID: | 64009 |
| Nearest Unigene: | Mm.331626 |
| Nearest Refseq: | NM_022027 |
| Nearest Ensembl: | ENSMUSG00000096054 |
| Gene Name: | Syne1 |
| Gene Alias: | 8B |
| Gene Description: | "spectrin repeat containing, nuclear envelope 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |