TSS: Hg 100155.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-21640 |entrez_id=123 |gc_percent=0.437811 |gene_alias=ADFP|ADRP |gene_description=perilipin 2 |gene_name=PLIN2 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
|ADRP= | |||
|all_trans=AK094196:-5 ENST00000434144.5:-28 uc064shi.1:-28 ENST00000494753.1:-40 uc003znp.2:-40 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-5 | |||
|distance_to_tss=-21640 | |distance_to_tss=-21640 | ||
|end=19149250 | |||
|entrez_id=123 | |entrez_id=123 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
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|nearest_refseq=NM_001122 | |nearest_refseq=NM_001122 | ||
|nearest_unigene=Hs.3416 | |nearest_unigene=Hs.3416 | ||
|num_trans=5 | |||
|species=human | |||
|start=19149241 | |||
|strand=- | |||
|transcript_name=AK094196 | |||
|tss_classification=yes | |||
|tss_id=hg_100155.1 | |tss_id=hg_100155.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -21640 |
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| Nearest PromoterID: | NM_001122 |
| Entrez ID: | 123 |
| Nearest Unigene: | Hs.3416 |
| Nearest Refseq: | NM_001122 |
| Nearest Ensembl: | ENSG00000147872 |
| Gene Name: | PLIN2 |
| Gene Alias: | ADFP |
| Gene Description: | perilipin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |