TSS: Hg 100214.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=3070 |entrez_id=3439 |gc_percent=0.363184 |gene_alias=IFL|IFN|IFN-ALPHA|IFN-alphaD|IFNA13|IFNA@ |gene_description=interferon al...") |
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{{TSSDetail | {{TSSDetail | ||
|IFN= | |||
|IFN-ALPHA= | |||
|IFN-alphaD= | |||
|IFNA13= | |||
|IFNA@= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=3070 | |distance_to_tss=3070 | ||
|end=21443525 | |||
|entrez_id=3439 | |entrez_id=3439 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_024013 | |nearest_refseq=NM_024013 | ||
|nearest_unigene=Hs.37026 | |nearest_unigene=Hs.37026 | ||
|num_trans=0 | |||
|species=human | |||
|start=21443522 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100214.1 | |tss_id=hg_100214.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:04, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3070 |
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| Nearest PromoterID: | NM_024013 |
| Entrez ID: | 3439 |
| Nearest Unigene: | Hs.37026 |
| Nearest Refseq: | NM_024013 |
| Nearest Ensembl: | ENSG00000197919 |
| Gene Name: | IFNA1 |
| Gene Alias: | IFL |
| Gene Description: | interferon alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |