TSS: Hg 100311.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=195259 |entrez_id=100506422 |gc_percent=0.467662 |gene_alias=- |gene_description=putative deoxyuridine 5'-triphosphate nucleotidohy...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=195259 | |distance_to_tss=195259 | ||
|end=26261938 | |||
|entrez_id=100506422 | |entrez_id=100506422 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
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|nearest_refseq=NM_001004352 | |nearest_refseq=NM_001004352 | ||
|nearest_unigene=Hs.533221 | |nearest_unigene=Hs.533221 | ||
|num_trans=0 | |||
|species=human | |||
|start=26261930 | |||
|strand=- | |||
|tata_box="-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" | |tata_box="-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100311.1 | |tss_id=hg_100311.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 195259 |
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Nearest PromoterID: | NM_001004352 |
Entrez ID: | 100506422 |
Nearest Unigene: | Hs.533221 |
Nearest Refseq: | NM_001004352 |
Nearest Ensembl: | |
Gene Name: | LOC100506422 |
Gene Alias: | - |
Gene Description: | putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.467662 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(CTCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCC,+,0.00)" |