TSS: Hg 10035.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000377834.8:0 ENST00000489730.1:0 NM_019089:0 uc001amx.4:0 uc057bug.1:0 AK091122:0 ENST00000487437.5:2 uc057buf.1:2 ENST00000377836.8:6 uc057bud.1:6 BC142687:10 BC132698:27 BC136963:27 KJ902672:87 AB463714:88 | |||
|chr=chr1 | |||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=6419926 | |||
|entrez_id=54626 | |entrez_id=54626 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=bHLHb40 | |gene_alias=bHLHb40 | ||
|gene_description=hes family bHLH transcription factor 2 | |gene_description=hes family bHLH transcription factor 2 | ||
|gene_name=HES2 | |gene_id=54626 | ||
|gene_name=hes family bHLH transcription factor 2 | |||
|gene_source=HGNC:16005 | |||
|gene_symbol=HES2 | |||
|gene_synonyms=bHLHb40 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16005 | |||
|nearest_ensembl=ENSG00000069812 | |nearest_ensembl=ENSG00000069812 | ||
|nearest_promoter_id=NM_019089 | |nearest_promoter_id=NM_019089 | ||
|nearest_refseq=NM_019089 | |nearest_refseq=NM_019089 | ||
|nearest_unigene=Hs.118727 | |nearest_unigene=Hs.118727 | ||
|num_trans=15 | |||
|species=human | |||
|start=6419908 | |||
|strand=- | |||
|tata_box="-35(CTCCCTTAAAGC,-,0.00)" | |tata_box="-35(CTCCCTTAAAGC,-,0.00)" | ||
|transcript_name=ENST00000377834.8 ENST00000489730.1 NM_019089 uc001amx.4 uc057bug.1 AK091122 | |||
|tss_classification=yes | |||
|tss_id=hg_10035.1 | |tss_id=hg_10035.1 | ||
|tss_score=1 | |||
|uniprot_id=K7EJQ0 Q9Y543 | |||
}} | }} |
Revision as of 17:07, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 2 |
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Nearest PromoterID: | NM_019089 |
Entrez ID: | 54626 |
Nearest Unigene: | Hs.118727 |
Nearest Refseq: | NM_019089 |
Nearest Ensembl: | ENSG00000069812 |
Gene Name: | hes family bHLH transcription factor 2 |
Gene Alias: | bHLHb40 |
Gene Description: | hes family bHLH transcription factor 2 |
Gene Type: | protein-coding |
CpG%: | 0.14 |
GC%: | 0.761194 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(CTCCCTTAAAGC,-,0.00)" |
TSS expression
Expression data not found.