TSS: Hg 179019.1: Difference between revisions

Revision as of 22:36, 16 June 2021

Basic information about the TSS

TSS ID:	hg_179019.1
Species:	human
Chr:	chr19

Start:	9621196
End:	9621239
Strand:	-

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000444802.5 ENST00000424629.5 ENST00000302851.8 ENST00000326044.9 ENST00000444611.5 ENST00000443819.5 ENST00000465974.5 ENST00000457965.5 ENST00000444519.5 ENST00000421525.5 ENST00000470932.5 ENST00000435550.5 ENST00000471053.5 ENST00000480167.5 ENST00000490893.5 ENST00000485150.1 ENST00000497409.1 NM_152289 NM_001330365 AK122974 BC032668 AK293004 AK304383
Distance:	0
GeneID:	93134
HGNC/MGI_ID:	HGNC:28684
UniProt_ID:	A8KAD9 C9IZJ4 C9J7U2 C9JQP3 F2Z3H5 F8W7U5 F8WAU2 F8WBU1 Q8N587

Gene_name:	zinc finger protein 561
Gene_symbol:	ZNF561
Gene_synonyms:	MGC45408
Gene_source:	HGNC:28684

TATA-Box annotation

Distance to TSS:	14
Nearest PromoterID:	NM_001330365
Entrez ID:	93134
Nearest Unigene:	Hs.720081
Nearest Refseq:	NM_152289
Nearest Ensembl:	ENSG00000171469
Gene Name:	zinc finger protein 561
Gene Alias:	-
Gene Description:	zinc finger protein 561
Gene Type:	protein-coding
CpG%:	0.085
GC%:	0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):	24(GCCTTTATGGTG,+,0.00)

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
-|all_trans=ENST00000444802.5:0 ENST00000424629.5:0 ENST00000326044.9:0 ENST00000444611.5:0 ENST00000443819.5:0 ENST00000465974.5:0 ENST00000457965.5:0 ENST00000444519.5:0 ENST00000421525.5:0 ENST00000470932.5:0 ENST00000435550.5:0 ENST00000471053.5:0 ENST00000480167.5:0 ENST00000490893.5:0 ENST00000485150.1:0 ENST00000497409.1:0 uc060taa.1:0 uc010dwu.4:0 uc060tab.1:0 uc060tac.1:0 uc060tae.1:0 uc060tag.1:0 uc060tai.1:0 uc060tal.1:0 uc060tam.1:0 uc060tan.1:0 uc060tao.1:0 uc060tap.1:0 uc060taq.1:0 uc060tar.1:0 uc060tas.1:0 uc060tat.1:0 AK122974:0 BC032668:0 AK293004:0 AK304383:0 NM_152289:-1 ENST00000495503.5:2 uc060tad.1:2 ENST00000479943.5:9 uc060tak.1:9 ENST00000302851.7:-160 uc002mlu.4:-160
+|all_trans=ENST00000444802.5:0 ENST00000424629.5:0 ENST00000302851.8:0 ENST00000326044.9:0 ENST00000444611.5:0 ENST00000443819.5:0 ENST00000465974.5:0 ENST00000457965.5:0 ENST00000444519.5:0 ENST00000421525.5:0 ENST00000470932.5:0 ENST00000435550.5:0 ENST00000471053.5:0 ENST00000480167.5:0 ENST00000490893.5:0 ENST00000485150.1:0 ENST00000497409.1:0 NM_152289:0 NM_001330365:0 AK122974:0 BC032668:0 AK293004:0 AK304383:0 ENST00000495503.5:2 ENST00000479943.5:9
 |chr=chr19
 |cpg_percent=0.085
 |distance=0
-|distance_to_tss=22
+|distance_to_tss=14
 |end=9621239
 |end_of_center_position=9621218
@@ Line 19: / Line 19: @@
 |hgnc_mgi_id=HGNC:28684
 |nearest_ensembl=ENSG00000171469
-|nearest_promoter_id=NM_152289
+|nearest_promoter_id=NM_001330365
 |nearest_refseq=NM_152289
 |nearest_unigene=Hs.720081
-|num_trans=43
+|num_trans=25
 |species=human
 |start=9621196
 |start_of_center_position=9621217
 |strand=-
-|tata_box="24(GCCTTTATGGTG,+,0.00)"
+|tata_box=24(GCCTTTATGGTG,+,0.00)
-|transcript_name=ENST00000444802.5 ENST00000424629.5 ENST00000326044.9 ENST00000444611.5 ENST00000443819.5 ENST00000465974.5 ENST00000457965.5 ENST00000444519.5 ENST00000421525.5 ENST00000470932.5 ENST00000435550.5 ENST00000471053.5 ENST00000480167.5 ENST00000490893.5 ENST00000485150.1 ENST00000497409.1 uc060taa.1 uc010dwu.4 uc060tab.1 uc060tac.1 uc060tae.1 uc060tag.1 uc060tai.1 uc060tal.1 uc060tam.1 uc060tan.1 uc060tao.1 uc060tap.1 uc060taq.1 uc060tar.1 uc060tas.1 uc060tat.1 AK122974 BC032668 AK293004 AK304383
+|transcript_name=ENST00000444802.5 ENST00000424629.5 ENST00000302851.8 ENST00000326044.9 ENST00000444611.5 ENST00000443819.5 ENST00000465974.5 ENST00000457965.5 ENST00000444519.5 ENST00000421525.5 ENST00000470932.5 ENST00000435550.5 ENST00000471053.5 ENST00000480167.5 ENST00000490893.5 ENST00000485150.1 ENST00000497409.1 NM_152289 NM_001330365 AK122974 BC032668 AK293004 AK304383
 |tss_classification=yes
 |tss_id=hg_179019.1
 |tss_score=1
-|uniprot_id=A8KAD9 C9IZJ4 C9J7U2 C9JQP3 F2Z3H5 F8W7U5 F8WAU2 F8WBU1
+|uniprot_id=A8KAD9 C9IZJ4 C9J7U2 C9JQP3 F2Z3H5 F8W7U5 F8WAU2 F8WBU1 Q8N587
 }}