TSS: Hg 10077.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-181 | ||
|end=7704573 | |end=7704573 | ||
|end_of_center_position=7704555 | |end_of_center_position=7704555 | ||
|entrez_id= | |entrez_id=23261 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
|gene_alias= | |gene_alias=CANPMR | ||
|gene_description= | |gene_description=calmodulin binding transcription activator 1 | ||
|gene_name= | |gene_name=CAMTA1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000171735 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001349622 | ||
|nearest_refseq= | |nearest_refseq=NM_015215 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.397705 | ||
|num_trans=0 | |num_trans=0 | ||
|species=human | |species=human | ||
Latest revision as of 15:27, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -181 |
|---|---|
| Nearest PromoterID: | NM_001349622 |
| Entrez ID: | 23261 |
| Nearest Unigene: | Hs.397705 |
| Nearest Refseq: | NM_015215 |
| Nearest Ensembl: | ENSG00000171735 |
| Gene Name: | CAMTA1 |
| Gene Alias: | CANPMR |
| Gene Description: | calmodulin binding transcription activator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |