TSS: Hg 234730.1: Difference between revisions

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{{peakPage
{{TSSDetail
|all_trans=NR_024540:-4 ENST00000488147.1:-204
|all_trans=NR_024540:-4 ENST00000488147.1:-204
|species=human
|chr=chr1
|chr=
|cpg_percent=0.135
|cpg_percent=
|distance=-4
|distance=-4
|distance_to_tss=
|distance_to_tss=14
|end=
|end=29366
|entrez_id=
|entrez_id=653635
|gc_percent=
|gc_percent=0.78607
|gene_alias=
|gene_alias=FAM39F|WASH5P
|gene_description=
|gene_description=WAS protein family homolog 7 pseudogene
|gene_id=653635
|gene_id=653635
|gene_name=WAS protein family homolog 7 pseudogene
|gene_name=WAS protein family homolog 7 pseudogene
Line 16: Line 15:
|gene_symbol=WASH7P
|gene_symbol=WASH7P
|gene_synonyms=FAM39F
|gene_synonyms=FAM39F
|gene_type=
|gene_type=pseudo
|hgnc_mgi_id=HGNC:38034
|hgnc_mgi_id=HGNC:38034
|nearest_ensembl=
|nearest_ensembl=
|nearest_promoter_id=
|nearest_promoter_id=NR_024540
|nearest_refseq=
|nearest_refseq=NR_024540
|nearest_unigene=
|nearest_unigene=Hs.446466
|num_trans=2
|num_trans=2
|peakPage=
|peak_id=hg_234730.1
|peak_id=hg_234730.1
|peak_score=
|peak_score=
|start=
|species=human
|strand=
|start=29346
|strand=-
|tata_box=
|tata_box=
|transcript_name=NR_024540
|transcript_name=NR_024540
|tss_classification=no
|tss_id=hg_234730.1
|tss_score=1
|uniprot_id=
|uniprot_id=
}}
}}

Revision as of 00:44, 13 March 2018

Basic information about the TSS


TSS ID:hg_234730.1
Species:human
Chr:chr1
Start:29346
End:29366
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:NR_024540
Distance:-4
GeneID:653635
HGNC/MGI_ID:HGNC:38034
UniProt_ID:
Gene_name:WAS protein family homolog 7 pseudogene
Gene_symbol:WASH7P
Gene_synonyms:FAM39F
Gene_source:HGNC:38034



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NR_024540
Entrez ID:653635
Nearest Unigene:Hs.446466
Nearest Refseq:NR_024540
Nearest Ensembl:
Gene Name:WAS protein family homolog 7 pseudogene
Gene Alias:FAM39F
Gene Description:WAS protein family homolog 7 pseudogene
Gene Type:pseudo
CpG%:0.135
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.