TSS: Hg 99811.1: Difference between revisions
From referenceTSS
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|AKL3L1= | |AKL3L1= | ||
|FIX= | |FIX= | ||
|all_trans=AK001951:0 ENST00000447596 | |all_trans=ENST00000381809.8:0 NM_016282:0 NM_001199852:0 AK001951:0 ENST00000447596.4:-16 AK001553:-16 AK298200:-16 BC013771:40 AK027534:82 DQ891660:94 DQ894847:94 AB021870:96 AF100785:114 AF086913:114 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=5 | ||
|end=4741211 | |end=4741211 | ||
|end_of_center_position=4741197 | |end_of_center_position=4741197 | ||
|entrez_id=50808 | |entrez_id=50808 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=AK3L1 | |gene_alias=AK3L1{{!}}AK6{{!}}AKL3L{{!}}AKL3L1{{!}}FIX | ||
|gene_description=adenylate kinase 3 | |gene_description=adenylate kinase 3 | ||
|gene_id=50808 | |gene_id=50808 | ||
|gene_name=adenylate kinase 3 | |gene_name=adenylate kinase 3; adenylate kinase 4 | ||
|gene_source=HGNC:17376 | |gene_source=HGNC:17376 HGNC:363 | ||
|gene_symbol=AK3 | |gene_symbol=AK3 AK4 | ||
|gene_synonyms=AKL3L1 | |gene_synonyms=AKL3L1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:17376 | |hgnc_mgi_id=HGNC:17376 HGNC:363 | ||
|nearest_ensembl=ENSG00000147853 | |nearest_ensembl=ENSG00000147853 | ||
|nearest_promoter_id=NM_001199852 | |nearest_promoter_id=NM_001199852 | ||
|nearest_refseq=NM_016282 | |nearest_refseq=NM_016282 | ||
|nearest_unigene=Hs.732022 | |nearest_unigene=Hs.732022 | ||
|num_trans= | |num_trans=14 | ||
|species=human | |species=human | ||
|start=4741182 | |start=4741182 | ||
|start_of_center_position=4741196 | |start_of_center_position=4741196 | ||
|strand=- | |strand=- | ||
|transcript_name=AK001951 | |transcript_name=ENST00000381809.8 NM_016282 NM_001199852 AK001951 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_99811.1 | |tss_id=hg_99811.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q9UIJ7 | ||
}} | }} | ||
Revision as of 22:12, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 5 |
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| Nearest PromoterID: | NM_001199852 |
| Entrez ID: | 50808 |
| Nearest Unigene: | Hs.732022 |
| Nearest Refseq: | NM_016282 |
| Nearest Ensembl: | ENSG00000147853 |
| Gene Name: | adenylate kinase 3; adenylate kinase 4 |
| Gene Alias: | AK3L1|AK6|AKL3L|AKL3L1|FIX |
| Gene Description: | adenylate kinase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.