TSS: Hg 100210.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
Line 10: Line 10:
|gc_percent=0.40796
|gc_percent=0.40796
|gene_alias=IFNAP22
|gene_alias=IFNAP22
|gene_description="interferon alpha 22, pseudogene"
|gene_description=interferon alpha 22, pseudogene
|gene_id=
|gene_id=
|gene_name="interferon, alpha 22, pseudogene"
|gene_name=interferon alpha 22, pseudogene
|gene_source=HGNC:5431
|gene_source=HGNC:5431
|gene_symbol=IFNA22P
|gene_symbol=IFNA22P
Line 27: Line 27:
|start_of_center_position=21278676
|start_of_center_position=21278676
|strand=-
|strand=-
|tata_box="-45(CCCTATTTAAGG,-,0.00)"
|tata_box=-45(CCCTATTTAAGG,-,0.00)
|transcript_name=ENST00000458710.2
|transcript_name=ENST00000458710.2
|tss_classification=no
|tss_classification=no

Revision as of 14:19, 14 June 2021

Basic information about the TSS


TSS ID:hg_100210.1
Species:human
Chr:chr9
Start:21278663
End:21278689
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000458710.2
Distance:45
GeneID:
HGNC/MGI_ID:HGNC:5431
UniProt_ID:
Gene_name:interferon alpha 22, pseudogene
Gene_symbol:IFNA22P
Gene_synonyms:
Gene_source:HGNC:5431



TATA-Box annotation


Distance to TSS:-113
Nearest PromoterID:NR_036676
Entrez ID:3453
Nearest Unigene:Hs.545842
Nearest Refseq:NR_036676
Nearest Ensembl:
Gene Name:interferon alpha 22, pseudogene
Gene Alias:IFNAP22
Gene Description:interferon alpha 22, pseudogene
Gene Type:pseudo
CpG%:0.005
GC%:0.40796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-45(CCCTATTTAAGG,-,0.00)



TSS expression

Expression data not found.