TSS: Hg 100213.1: Difference between revisions
From referenceTSS
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|IFNA2B= | |IFNA2B= | ||
|INFA2= | |INFA2= | ||
|all_trans= | |all_trans=ENST00000380206.4:0 NM_000605:0 M54886:8 V00544:8 V00549:8 BC104163:22 BC104164:22 BC074936:23 BC074937:23 KJ891428:67 JN591568:67 JN591569:67 JN591570:67 JN848522:67 KY780371:67 LQ884075:67 MP518003:67 AB590747:67 CR541921:67 V00548:85 AY255838:136 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=1 | ||
|end=21385398 | |end=21385398 | ||
|end_of_center_position=21385397 | |end_of_center_position=21385397 | ||
|entrez_id=3440 | |entrez_id=3440 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=IFN-alphaA | |gene_alias=IFN-alphaA|IFNA|IFNA2B|INFA2 | ||
|gene_description=interferon alpha 2 | |gene_description=interferon alpha 2 | ||
|gene_id=3440 | |gene_id=3440 | ||
|gene_name= | |gene_name=interferon alpha 2 | ||
|gene_source=HGNC:5423 | |gene_source=HGNC:5423 | ||
|gene_symbol=IFNA2 | |gene_symbol=IFNA2 | ||
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|nearest_refseq=NM_000605 | |nearest_refseq=NM_000605 | ||
|nearest_unigene=Hs.211575 | |nearest_unigene=Hs.211575 | ||
|num_trans= | |num_trans=21 | ||
|species=human | |species=human | ||
|start=21385395 | |start=21385395 | ||
|start_of_center_position=21385396 | |start_of_center_position=21385396 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(CCCTATTTAAGG,-,0.00) | ||
|transcript_name=NM_000605 | |transcript_name=ENST00000380206.4 NM_000605 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100213.1 | |tss_id=hg_100213.1 | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_000605 |
| Entrez ID: | 3440 |
| Nearest Unigene: | Hs.211575 |
| Nearest Refseq: | NM_000605 |
| Nearest Ensembl: | ENSG00000188379 |
| Gene Name: | interferon alpha 2 |
| Gene Alias: | IFN-alphaA |
| Gene Description: | interferon alpha 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CCCTATTTAAGG,-,0.00) |
TSS expression
Expression data not found.