TSS: Mm 159516.1: Difference between revisions
From referenceTSS
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|Mup5= | |Mup5= | ||
|OTTMUSG00000008509= | |OTTMUSG00000008509= | ||
|all_trans=ENSMUST00000163931.7 | |all_trans=ENSMUST00000163931.7:64 ENSMUST00000095058.4:83 NM_001347131:123 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=64 | |distance=64 | ||
|distance_to_tss=- | |distance_to_tss=-123 | ||
|end=60222663 | |end=60222663 | ||
|end_of_center_position=60222663 | |end_of_center_position=60222663 | ||
|entrez_id=100041687 | |entrez_id=100041687 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
|gene_alias=Gm12809 | |gene_alias=Gm12809{{!}}Mup5 | ||
|gene_description=major urinary protein 8 | |gene_description=major urinary protein 8 | ||
|gene_id=100041687 | |gene_id=100041687 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:3709619 | |hgnc_mgi_id=MGI:3709619 | ||
|nearest_ensembl=ENSMUSG00000078687 | |nearest_ensembl=ENSMUSG00000078687 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001347131 | ||
|nearest_refseq=NM_001134676 | |nearest_refseq=NM_001134676 | ||
|nearest_unigene=Mm.457982 | |nearest_unigene=Mm.457982 | ||
|num_trans= | |num_trans=3 | ||
|species=mouse | |species=mouse | ||
|start=60222662 | |start=60222662 | ||
|start_of_center_position=60222662 | |start_of_center_position=60222662 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000163931.7 | |transcript_name=ENSMUST00000163931.7 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_159516.1 | |tss_id=mm_159516.1 | ||
Revision as of 15:16, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -123 |
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| Nearest PromoterID: | NM_001347131 |
| Entrez ID: | 100041687 |
| Nearest Unigene: | Mm.457982 |
| Nearest Refseq: | NM_001134676 |
| Nearest Ensembl: | ENSMUSG00000078687 |
| Gene Name: | major urinary protein 8 |
| Gene Alias: | Gm12809|Mup5 |
| Gene Description: | major urinary protein 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.