TSS: Hg 100279.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000664493.1:-8 ENST00000640003.1:-37 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=-8 | ||
|distance_to_tss=233750 | |distance_to_tss=233750 | ||
|end=23438663 | |end=23438663 | ||
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|gene_name=LOC101929563 | |gene_name=LOC101929563 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000283982 | ||
|nearest_promoter_id=NR_121602 | |nearest_promoter_id=NR_121602 | ||
|nearest_refseq=NR_121602 | |nearest_refseq=NR_121602 | ||
|nearest_unigene=Hs.533220 | |nearest_unigene=Hs.533220 | ||
|num_trans= | |num_trans=2 | ||
|species=human | |species=human | ||
|start=23438635 | |start=23438635 | ||
|start_of_center_position=23438649 | |start_of_center_position=23438649 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000664493.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100279.1 | |tss_id=hg_100279.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 14:21, 14 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 233750 |
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| Nearest PromoterID: | NR_121602 |
| Entrez ID: | 101929563 |
| Nearest Unigene: | Hs.533220 |
| Nearest Refseq: | NR_121602 |
| Nearest Ensembl: | ENSG00000283982 |
| Gene Name: | LOC101929563 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101929563 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |