TSS: Hg 100349.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
Line 5: | Line 5: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=5396 | ||
|end=27568087 | |end=27568087 | ||
|end_of_center_position=27568086 | |end_of_center_position=27568086 | ||
|entrez_id=203228 | |entrez_id=203228 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
|gene_alias=ALSFTD | |gene_alias=ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 | ||
|gene_description= | |gene_description=C9orf72-SMCR8 complex subunit | ||
|gene_name=C9orf72 | |gene_name=C9orf72 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
Line 24: | Line 24: | ||
|start_of_center_position=27568085 | |start_of_center_position=27568085 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=1(CCTTTTAGCGGC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no |
Revision as of 14:23, 14 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 5396 |
---|---|
Nearest PromoterID: | NM_018325 |
Entrez ID: | 203228 |
Nearest Unigene: | Hs.493639 |
Nearest Refseq: | NM_018325 |
Nearest Ensembl: | ENSG00000147894 |
Gene Name: | C9orf72 |
Gene Alias: | ALSFTD |
Gene Description: | C9orf72-SMCR8 complex subunit |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.348259 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 1(CCTTTTAGCGGC,+,0.00) |