TSS: Hg 100379.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-343022 | |distance_to_tss=-343022 | ||
|end=31724516 | |end=31724516 | ||
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|start_of_center_position=31724512 | |start_of_center_position=31724512 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(GGTTTTATAAGG,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:18, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -343022 |
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| Nearest PromoterID: | NR_135134 |
| Entrez ID: | 101929620 |
| Nearest Unigene: | Hs.547175 |
| Nearest Refseq: | NR_135134 |
| Nearest Ensembl: | ENSG00000260720 |
| Gene Name: | LINC01243 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1243 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GGTTTTATAAGG,-,0.00) |