TSS: Hg 100396.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|CI=
|CI=
|all_trans=KJ891678:14 CR456920:15 AF035840:-28 BC029247:-29 AK289702:-38 AF067167:-55 BC016708:-56 ENST00000350021.2:-59 uc003zrf.3:-59 BC009801:-59 ENST00000379847.7:-62 uc003zre.3:-62 ENST00000366466.5:-84 NM_002493:-84 NM_001199987:-84 NM_182739:-84 uc022bfg.2:-84
|all_trans=KJ891678:14 CR456920:15 AF035840:-28 BC029247:-29 AK289702:-38 AF067167:-55 BC016708:-56 ENST00000379847.8:-59 ENST00000350021.2:-59 NM_002493:-59 NM_182739:-59 BC009801:-59 ENST00000366466.5:-84 NM_001199987:-84
|chr=chr9
|chr=chr9
|cpg_percent=0.125
|cpg_percent=0.125
|distance=14
|distance=14
|distance_to_tss=97
|distance_to_tss=72
|end=32573100
|end=32573100
|end_of_center_position=32573088
|end_of_center_position=32573088
|entrez_id=4712
|entrez_id=4712
|gc_percent=0.616915
|gc_percent=0.616915
|gene_alias=B17
|gene_alias=B17|CI
|gene_description=NADH:ubiquinone oxidoreductase subunit B6
|gene_description=NADH:ubiquinone oxidoreductase subunit B6
|gene_name=NDUFB6
|gene_name=NDUFB6
|gene_type=protein-coding
|gene_type=protein-coding
|nearest_ensembl=ENSG00000165264
|nearest_ensembl=ENSG00000165264
|nearest_promoter_id=NM_002493
|nearest_promoter_id=NM_182739
|nearest_refseq=NM_002493
|nearest_refseq=NM_002493
|nearest_unigene=Hs.493668
|nearest_unigene=Hs.493668
|num_trans=17
|num_trans=14
|species=human
|species=human
|start=32573074
|start=32573074

Revision as of 15:18, 15 June 2021

Basic information about the TSS


TSS ID:hg_100396.1
Species:human
Chr:chr9
Start:32573074
End:32573100
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:KJ891678
Distance:14
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:NDUFB6
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:72
Nearest PromoterID:NM_182739
Entrez ID:4712
Nearest Unigene:Hs.493668
Nearest Refseq:NM_002493
Nearest Ensembl:ENSG00000165264
Gene Name:NDUFB6
Gene Alias:B17
Gene Description:NADH:ubiquinone oxidoreductase subunit B6
Gene Type:protein-coding
CpG%:0.125
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):