TSS: Hg 100400.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-67944 | |distance_to_tss=-67944 | ||
|end=32703617 | |end=32703617 | ||
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|entrez_id=138474 | |entrez_id=138474 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=TAF(II)210 | |gene_alias=TAF(II)210|TAF2A2 | ||
|gene_description=TATA-box binding protein associated factor 1 like | |gene_description=TATA-box binding protein associated factor 1 like | ||
|gene_name=TAF1L | |gene_name=TAF1L | ||
| Line 22: | Line 22: | ||
|start_of_center_position=32703613 | |start_of_center_position=32703613 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-32(TTCTTGAAAAGG,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 15:19, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -67944 |
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| Nearest PromoterID: | NM_153809 |
| Entrez ID: | 138474 |
| Nearest Unigene: | Hs.591086 |
| Nearest Refseq: | NM_153809 |
| Nearest Ensembl: | ENSG00000122728 |
| Gene Name: | TAF1L |
| Gene Alias: | TAF(II)210 |
| Gene Description: | TATA-box binding protein associated factor 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(TTCTTGAAAAGG,-,0.00) |