TSS: Hg 100405.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 7: | Line 7: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=31716 | |distance_to_tss=31716 | ||
|end=32969863 | |end=32969863 | ||
| Line 13: | Line 13: | ||
|entrez_id=54840 | |entrez_id=54840 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=AOA | |gene_alias=AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT | ||
|gene_description=aprataxin | |gene_description=aprataxin | ||
|gene_name=APTX | |gene_name=APTX | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000137074 | |nearest_ensembl=ENSG00000137074 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001195249 | ||
|nearest_refseq=NM_017692 | |nearest_refseq=NM_017692 | ||
|nearest_unigene=Hs.20158 | |nearest_unigene=Hs.20158 | ||
Revision as of 15:19, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 31716 |
|---|---|
| Nearest PromoterID: | NM_001195249 |
| Entrez ID: | 54840 |
| Nearest Unigene: | Hs.20158 |
| Nearest Refseq: | NM_017692 |
| Nearest Ensembl: | ENSG00000137074 |
| Gene Name: | APTX |
| Gene Alias: | AOA |
| Gene Description: | aprataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |