TSS: Mm 9820.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 3: | Line 3: | ||
|D1Ertd578e= | |D1Ertd578e= | ||
|Fbx28= | |Fbx28= | ||
|all_trans=ENSMUST00000051431.9:0 ENSMUST00000192544.5:0 NM_175127 | |all_trans=ENSMUST00000051431.9:0 ENSMUST00000192544.5:0 NM_175127:0 AK122295:0 BC094542:0 AK076211:0 AK018321:0 AK077653:0 ENSMUST00000194213.1:-4 AK162091:14 ENSMUST00000195061.5:15 AK162188:99 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 12: | Line 12: | ||
|entrez_id=67948 | |entrez_id=67948 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=4833428J17Rik | |gene_alias=4833428J17Rik{{!}}5730505P19Rik{{!}}D1Ertd578e{{!}}Fbx28{{!}}mKIAA0483 | ||
|gene_description=F-box protein 28 | |gene_description=F-box protein 28 | ||
|gene_id=67948 | |gene_id=67948 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_175127 | |nearest_refseq=NM_175127 | ||
|nearest_unigene=Mm.30737 | |nearest_unigene=Mm.30737 | ||
|num_trans= | |num_trans=12 | ||
|species=mouse | |species=mouse | ||
|start=182341585 | |start=182341585 | ||
|start_of_center_position=182341605 | |start_of_center_position=182341605 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000051431.9 ENSMUST00000192544.5 NM_175127 | |transcript_name=ENSMUST00000051431.9 ENSMUST00000192544.5 NM_175127 AK122295 BC094542 AK076211 AK018321 AK077653 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_9820.1 | |tss_id=mm_9820.1 | ||
Revision as of 03:23, 22 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_175127 |
| Entrez ID: | 67948 |
| Nearest Unigene: | Mm.30737 |
| Nearest Refseq: | NM_175127 |
| Nearest Ensembl: | ENSMUSG00000047539 |
| Gene Name: | F-box protein 28 |
| Gene Alias: | 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 |
| Gene Description: | F-box protein 28 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.